valerius

valerius is a simple Bioinformatics toolset for processing Biological sequences.

Example

>>> import valerius
>>> sequence = valerius.from_string("TGACAATATATATATATATATAATGCTAGC")
>>> sequence.type
'DNA'
>>> sequence.gc_content
0.2

Table of Contents

• Installing
  • pip
  • Development
  • Requirements
• Overview
  • From String
  • Opening
• Full API
  • valerius.sequences
  • valerius.utilities
• Contributing to valerius
  • Raising an Issue
  • Pull Requests
    • How do Pull Requests work?
    • What does and doesn’t make a good Pull Request?
    • Requirements
      • Style
      • Documentation
      • Tests
        • Unit Tests
        • Integration Tests
      • Final Checks
• Changelog
  • Release 0.2.0
  • Release 0.1.0